Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Gm6888-201ENSMUST00000221983 706 ntBASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
B020004C17RikJ3QP07 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Gm8410-201ENSMUST00000117225 605 ntBASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Gm13015-201ENSMUST00000118674 204 ntBASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Gm38294-201ENSMUST00000192831 381 ntBASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
B020004C17RikJ3QP07 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Gm28630-201ENSMUST00000187806 498 ntBASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
B020004C17RikJ3QP07 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Gm27920-201ENSMUST00000183953 96 ntBASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
B020004C17RikJ3QP07 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
B020004C17RikJ3QP07 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms