Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim34bJ3QNR8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim34bJ3QNR8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim34bJ3QNR8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim34bJ3QNR8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim34bJ3QNR8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim34bJ3QNR8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim34bJ3QNR8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim34bJ3QNR8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.83■□□□□ 0.6
Trim34bJ3QNR8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Gm16198-201ENSMUST00000118766 670 ntBASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34bJ3QNR8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Gm2272-201ENSMUST00000194903 582 ntBASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.81■□□□□ 0.6
Trim34bJ3QNR8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gm13365-201ENSMUST00000121188 973 ntBASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gm11745-201ENSMUST00000121669 448 ntBASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms