Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Mir7071-201ENSMUST00000184847 69 ntBASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh1F7BJK1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Gm18032-201ENSMUST00000222541 538 ntBASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh1F7BJK1 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Mir770-201ENSMUST00000103252 94 ntBASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms