Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
C530025M09RikF6RGA8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
C530025M09RikF6RGA8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
C530025M09RikF6RGA8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
C530025M09RikF6RGA8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
C530025M09RikF6RGA8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Gm5587-201ENSMUST00000206270 674 ntBASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
C530025M09RikF6RGA8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
C530025M09RikF6RGA8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms