Protein–RNA interactions for Protein: E9Q7P1

Col22a1, Collagen, type XXII, alpha 1, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col22a1E9Q7P1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Col22a1E9Q7P1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 AC155286.1-201ENSMUST00000218632 448 ntBASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col22a1E9Q7P1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Rn7s1-201ENSMUST00000174924 300 ntBASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Rn7s2-201ENSMUST00000175032 300 ntBASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Gm26461-201ENSMUST00000175064 290 ntBASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Dupd1-202ENSMUST00000224735 548 ntBASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col22a1E9Q7P1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Gm37424-201ENSMUST00000191727 561 ntBASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Gm7172-201ENSMUST00000218047 1152 ntBASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Gm10499-201ENSMUST00000174094 934 ntBASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.43■□□□□ 0.7
Col22a1E9Q7P1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Gm8835-201ENSMUST00000173096 1169 ntBASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 AC238811.3-201ENSMUST00000225422 709 ntBASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col22a1E9Q7P1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col22a1E9Q7P1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col22a1E9Q7P1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC19.41■□□□□ 0.7
Col22a1E9Q7P1 Gm12329-201ENSMUST00000120829 1007 ntBASIC19.41■□□□□ 0.7
Col22a1E9Q7P1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col22a1E9Q7P1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col22a1E9Q7P1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC19.41■□□□□ 0.7
Col22a1E9Q7P1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.41■□□□□ 0.7
Col22a1E9Q7P1 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.41■□□□□ 0.7
Col22a1E9Q7P1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms