Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Chd6A3KFM7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd6A3KFM7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.45□□□□□ -0.42
Chd6A3KFM7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.45□□□□□ -0.42
Chd6A3KFM7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.45□□□□□ -0.42
Chd6A3KFM7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.45□□□□□ -0.42
Chd6A3KFM7 Gm29199-201ENSMUST00000187766 775 ntBASIC12.45□□□□□ -0.42
Chd6A3KFM7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.44□□□□□ -0.42
Chd6A3KFM7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Mir6392-201ENSMUST00000184924 108 ntBASIC12.44□□□□□ -0.42
Chd6A3KFM7 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Chd6A3KFM7 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.44□□□□□ -0.42
Chd6A3KFM7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd6A3KFM7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.43□□□□□ -0.42
Chd6A3KFM7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.43□□□□□ -0.42
Chd6A3KFM7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd6A3KFM7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd6A3KFM7 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.42□□□□□ -0.42
Chd6A3KFM7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.42□□□□□ -0.42
Chd6A3KFM7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.42□□□□□ -0.42
Chd6A3KFM7 Gm15483-201ENSMUST00000120338 456 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms