Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm29257-201ENSMUST00000186115 639 ntBASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm12008-201ENSMUST00000117791 755 ntBASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm11336-201ENSMUST00000118168 334 ntBASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms