Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh7A0A0A6YY83 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh7A0A0A6YY83 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh7A0A0A6YY83 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh7A0A0A6YY83 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.9■□□□□ 0.14
Pcdh7A0A0A6YY83 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh7A0A0A6YY83 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh7A0A0A6YY83 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh7A0A0A6YY83 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm5682-201ENSMUST00000173402 505 ntBASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm6550-201ENSMUST00000187574 993 ntBASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm5864-201ENSMUST00000202263 970 ntBASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm10060-201ENSMUST00000212002 111 ntBASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh7A0A0A6YY83 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Grk6-207ENSMUST00000225925 2769 ntBASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm15173-201ENSMUST00000122049 433 ntBASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.88■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh7A0A0A6YY83 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 AV026068-213ENSMUST00000223675 1171 ntBASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh7A0A0A6YY83 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms