Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm7862-201ENSMUST00000121461 292 ntBASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Mzt1-203ENSMUST00000227948 952 ntBASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 App-207ENSMUST00000227737 2827 ntBASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm25990-201ENSMUST00000102440 86 ntBASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm13418-201ENSMUST00000119097 944 ntBASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbc1A0A0A6YWV4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbc1A0A0A6YWV4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbc1A0A0A6YWV4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbc1A0A0A6YWV4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbc1A0A0A6YWV4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbc1A0A0A6YWV4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbc1A0A0A6YWV4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm8344-201ENSMUST00000119813 856 ntBASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm11780-201ENSMUST00000136880 516 ntBASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms