Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 BC037039-201ENSMUST00000192003 2205 ntBASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-7A0A075B6B0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-7A0A075B6B0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-7A0A075B6B0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Gm24589-201ENSMUST00000116692 94 ntBASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav6d-7A0A075B6B0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms