Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-4A0A075B652 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav5-4A0A075B652 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Trav5-4A0A075B652 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5-4A0A075B652 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-4A0A075B652 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Gm13312-201ENSMUST00000119631 718 ntBASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-4A0A075B652 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms