Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Gm11249-201ENSMUST00000117071 859 ntBASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Gm42545-201ENSMUST00000202755 922 ntBASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav8-1A0A075B641 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm8495-201ENSMUST00000188740 694 ntBASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm10517-202ENSMUST00000192970 758 ntBASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav8-1A0A075B641 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Gm37025-201ENSMUST00000195159 829 ntBASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms