Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cldn13Q9Z0S4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 BC037039-201ENSMUST00000192003 2205 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm13884-201ENSMUST00000118103 829 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44357-201ENSMUST00000195897 142 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm19658-201ENSMUST00000196231 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44367-201ENSMUST00000196836 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44350-201ENSMUST00000197197 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44390-201ENSMUST00000197533 144 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44313-201ENSMUST00000198018 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44486-201ENSMUST00000198508 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44314-201ENSMUST00000199263 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44394-201ENSMUST00000199558 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44484-201ENSMUST00000199873 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44466-201ENSMUST00000200264 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm44359-201ENSMUST00000200671 138 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn13Q9Z0S4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cldn13Q9Z0S4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Gm6257-201ENSMUST00000163864 910 ntBASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn13Q9Z0S4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms