Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clcn2Q9R0A1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clcn2Q9R0A1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Clcn2Q9R0A1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Clcn2Q9R0A1 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.83■□□□□ 0.13
Clcn2Q9R0A1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clcn2Q9R0A1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Gm34391-201ENSMUST00000203706 907 ntBASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn2Q9R0A1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Rprl3-201ENSMUST00000157400 290 ntBASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn2Q9R0A1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms