Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm27300-201ENSMUST00000184085 97 ntBASIC13.6□□□□□ -0.23
Nubp1Q9R060 Gm27335-201ENSMUST00000184758 97 ntBASIC13.6□□□□□ -0.23
Nubp1Q9R060 Gm20949-201ENSMUST00000206478 952 ntBASIC13.6□□□□□ -0.23
Nubp1Q9R060 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.6□□□□□ -0.23
Nubp1Q9R060 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Mir6404-201ENSMUST00000183699 94 ntBASIC13.59□□□□□ -0.23
Nubp1Q9R060 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.59□□□□□ -0.23
Nubp1Q9R060 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.59□□□□□ -0.23
Nubp1Q9R060 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC13.59□□□□□ -0.23
Nubp1Q9R060 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.59□□□□□ -0.23
Nubp1Q9R060 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nubp1Q9R060 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Nubp1Q9R060 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nubp1Q9R060 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nubp1Q9R060 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Gm27301-201ENSMUST00000184012 127 ntBASIC13.58□□□□□ -0.24
Nubp1Q9R060 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.58□□□□□ -0.24
Nubp1Q9R060 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.58□□□□□ -0.24
Nubp1Q9R060 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 AC154828.2-201ENSMUST00000220908 1070 ntBASIC13.58□□□□□ -0.24
Nubp1Q9R060 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.58□□□□□ -0.24
Nubp1Q9R060 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nubp1Q9R060 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nubp1Q9R060 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nubp1Q9R060 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.58□□□□□ -0.24
Nubp1Q9R060 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.57□□□□□ -0.24
Nubp1Q9R060 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nubp1Q9R060 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms