Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Gm4459-201ENSMUST00000118750 468 ntBASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Gm7506-201ENSMUST00000207758 815 ntBASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Gm18622-201ENSMUST00000219361 595 ntBASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps29Q9QZ88 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 BC037039-201ENSMUST00000192003 2205 ntBASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps29Q9QZ88 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Gm14722-201ENSMUST00000118943 689 ntBASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Gm17807-201ENSMUST00000186869 298 ntBASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Gm7977-201ENSMUST00000193787 748 ntBASIC14.83□□□□□ -0.04
Vps29Q9QZ88 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Gm8655-201ENSMUST00000221159 852 ntBASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vps29Q9QZ88 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Gm8344-201ENSMUST00000119813 856 ntBASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms