Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Gm11355-201ENSMUST00000121120 306 ntBASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Gm29257-201ENSMUST00000186115 639 ntBASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Gm18959-201ENSMUST00000208954 655 ntBASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Gm9987-201ENSMUST00000069768 567 ntBASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Gm7889-201ENSMUST00000185591 958 ntBASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm4Q9QXA5 Efs-202ENSMUST00000227037 2540 ntBASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms