Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a2Q9JLR1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a2Q9JLR1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Sec61a2Q9JLR1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a2Q9JLR1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a2Q9JLR1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.96□□□□□ -0.18
Sec61a2Q9JLR1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.96□□□□□ -0.18
Sec61a2Q9JLR1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a2Q9JLR1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a2Q9JLR1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a2Q9JLR1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Gm6257-201ENSMUST00000163864 910 ntBASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Gm27867-201ENSMUST00000184778 125 ntBASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.94□□□□□ -0.18
Sec61a2Q9JLR1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms