Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Gm2274-201ENSMUST00000184539 609 ntBASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Gm10052-201ENSMUST00000168019 960 ntBASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Gm7729-201ENSMUST00000050143 801 ntBASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Efs-202ENSMUST00000227037 2540 ntBASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Hmgn5Q9JL35 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Gm44430-201ENSMUST00000203376 995 ntBASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn5Q9JL35 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Gm26039-201ENSMUST00000158152 144 ntBASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.42■□□□□ 0.38
Hmgn5Q9JL35 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms