Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Gm5745-201ENSMUST00000183748 313 ntBASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Gm13823-201ENSMUST00000119930 345 ntBASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn5aQ9JJV9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn5aQ9JJV9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Gm43438-201ENSMUST00000198133 379 ntBASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn5aQ9JJV9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms