Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm11355-201ENSMUST00000121120 306 ntBASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tnfrsf13bQ9ET35 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms