Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Gm3375-201ENSMUST00000203929 796 ntBASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1cQ9ES64 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.78■□□□□ 0.44
Ush1cQ9ES64 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Gm43799-201ENSMUST00000201845 579 ntBASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Ush1cQ9ES64 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ush1cQ9ES64 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ush1cQ9ES64 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Ush1cQ9ES64 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ush1cQ9ES64 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ush1cQ9ES64 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms