Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.52■□□□□ 0.08
Vps35Q9EQH3 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.52■□□□□ 0.08
Vps35Q9EQH3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps35Q9EQH3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Gm13884-201ENSMUST00000118103 829 ntBASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps35Q9EQH3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Sybu-209ENSMUST00000228639 4113 ntBASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Gm5864-201ENSMUST00000202263 970 ntBASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Gm6376-201ENSMUST00000209407 580 ntBASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps35Q9EQH3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.49■□□□□ 0.07
Vps35Q9EQH3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.49■□□□□ 0.07
Vps35Q9EQH3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps35Q9EQH3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms