Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Gm4974-201ENSMUST00000209974 875 ntBASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Mbd3l1Q9D9H3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.4□□□□□ -0.26
Mbd3l1Q9D9H3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Gm9959-201ENSMUST00000068277 390 ntBASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd3l1Q9D9H3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Gm24841-201ENSMUST00000158676 357 ntBASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Mbd3l1Q9D9H3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd3l1Q9D9H3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Mbd3l1Q9D9H3 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.37□□□□□ -0.27
Mbd3l1Q9D9H3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms