Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.34■□□□□ 0.85
U2af1Q9D883 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
U2af1Q9D883 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
U2af1Q9D883 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2af1Q9D883 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2af1Q9D883 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2af1Q9D883 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2af1Q9D883 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
U2af1Q9D883 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2af1Q9D883 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2af1Q9D883 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
U2af1Q9D883 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2af1Q9D883 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
U2af1Q9D883 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2af1Q9D883 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2af1Q9D883 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.33■□□□□ 0.84
U2af1Q9D883 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2af1Q9D883 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2af1Q9D883 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
U2af1Q9D883 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2af1Q9D883 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
U2af1Q9D883 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.33■□□□□ 0.84
U2af1Q9D883 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
U2af1Q9D883 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.32■□□□□ 0.84
U2af1Q9D883 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
U2af1Q9D883 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 Gm8000-201ENSMUST00000188378 592 ntBASIC20.32■□□□□ 0.84
U2af1Q9D883 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.32■□□□□ 0.84
U2af1Q9D883 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
U2af1Q9D883 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2af1Q9D883 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.31■□□□□ 0.84
U2af1Q9D883 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
U2af1Q9D883 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.31■□□□□ 0.84
U2af1Q9D883 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Dancr-204ENSMUST00000132389 2347 ntBASIC20.31■□□□□ 0.84
U2af1Q9D883 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2af1Q9D883 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.3■□□□□ 0.84
U2af1Q9D883 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
U2af1Q9D883 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.3■□□□□ 0.84
U2af1Q9D883 Gm15467-201ENSMUST00000120582 445 ntBASIC20.3■□□□□ 0.84
U2af1Q9D883 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.3■□□□□ 0.84
U2af1Q9D883 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.3■□□□□ 0.84
U2af1Q9D883 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.3■□□□□ 0.84
U2af1Q9D883 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2af1Q9D883 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
U2af1Q9D883 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.29■□□□□ 0.84
U2af1Q9D883 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Gm5264-201ENSMUST00000190584 848 ntBASIC20.29■□□□□ 0.84
U2af1Q9D883 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
U2af1Q9D883 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC20.29■□□□□ 0.84
U2af1Q9D883 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms