Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chaf1bQ9D0N7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chaf1bQ9D0N7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chaf1bQ9D0N7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Chaf1bQ9D0N7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chaf1bQ9D0N7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chaf1bQ9D0N7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chaf1bQ9D0N7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chaf1bQ9D0N7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chaf1bQ9D0N7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Gm13436-201ENSMUST00000120418 567 ntBASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chaf1bQ9D0N7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms