Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ssr1Q9CY50 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ssr1Q9CY50 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ssr1Q9CY50 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Gm6345-202ENSMUST00000180900 204 ntBASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Mir7071-201ENSMUST00000184847 69 ntBASIC16.82■□□□□ 0.28
Ssr1Q9CY50 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.82■□□□□ 0.28
Ssr1Q9CY50 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssr1Q9CY50 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ssr1Q9CY50 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms