Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rnf135Q9CWS1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Gm12895-201ENSMUST00000122214 226 ntBASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf135Q9CWS1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf135Q9CWS1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Gm13884-201ENSMUST00000118103 829 ntBASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf135Q9CWS1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rnf135Q9CWS1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rnf135Q9CWS1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf135Q9CWS1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf135Q9CWS1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf135Q9CWS1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf135Q9CWS1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf135Q9CWS1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf135Q9CWS1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms