Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Gm14722-201ENSMUST00000118943 689 ntBASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 BC037039-201ENSMUST00000192003 2205 ntBASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb1Q9CQ70 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb1Q9CQ70 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Gm27704-201ENSMUST00000185094 107 ntBASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Gm19164-201ENSMUST00000210667 640 ntBASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb1Q9CQ70 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Gm15165-201ENSMUST00000118140 502 ntBASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
H2afb1Q9CQ70 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms