Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim34aQ99PP6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Gm10154-201ENSMUST00000084445 354 ntBASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34aQ99PP6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim34aQ99PP6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim34aQ99PP6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim34aQ99PP6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim34aQ99PP6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim34aQ99PP6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim34aQ99PP6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim34aQ99PP6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim34aQ99PP6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.02■□□□□ 0.63
Trim34aQ99PP6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Gm25948-201ENSMUST00000175334 112 ntBASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim34aQ99PP6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Trim34aQ99PP6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19■□□□□ 0.63
Trim34aQ99PP6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19■□□□□ 0.63
Trim34aQ99PP6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Trim34aQ99PP6 Gm18057-201ENSMUST00000208220 503 ntBASIC19■□□□□ 0.63
Trim34aQ99PP6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Trim34aQ99PP6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim34aQ99PP6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Trim34aQ99PP6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trim34aQ99PP6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34aQ99PP6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms