Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh4Q99MT2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh4Q99MT2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msh4Q99MT2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh4Q99MT2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh4Q99MT2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh4Q99MT2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Msh4Q99MT2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.1■□□□□ 0.01
Msh4Q99MT2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Gm11452-201ENSMUST00000122376 690 ntBASIC15.1■□□□□ 0.01
Msh4Q99MT2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.1■□□□□ 0.01
Msh4Q99MT2 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.1■□□□□ 0.01
Msh4Q99MT2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.1■□□□□ 0.01
Msh4Q99MT2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Msh4Q99MT2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.09■□□□□ 0.01
Msh4Q99MT2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Msh4Q99MT2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.09■□□□□ 0.01
Msh4Q99MT2 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.09■□□□□ 0.01
Msh4Q99MT2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh4Q99MT2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh4Q99MT2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh4Q99MT2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh4Q99MT2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh4Q99MT2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Msh4Q99MT2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Msh4Q99MT2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh4Q99MT2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.08■□□□□ 0
Msh4Q99MT2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh4Q99MT2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh4Q99MT2 Gm7506-201ENSMUST00000207758 815 ntBASIC15.08■□□□□ 0
Msh4Q99MT2 Mzt1-203ENSMUST00000227948 952 ntBASIC15.08■□□□□ 0
Msh4Q99MT2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh4Q99MT2 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.08■□□□□ 0
Msh4Q99MT2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh4Q99MT2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh4Q99MT2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
Msh4Q99MT2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh4Q99MT2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh4Q99MT2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh4Q99MT2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Msh4Q99MT2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh4Q99MT2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Msh4Q99MT2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Msh4Q99MT2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Msh4Q99MT2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh4Q99MT2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Msh4Q99MT2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh4Q99MT2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.07■□□□□ 0
Msh4Q99MT2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms