Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Gm12151-201ENSMUST00000121374 290 ntBASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Gm16198-201ENSMUST00000118766 670 ntBASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx6-1Q99MA9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Gm13823-201ENSMUST00000119930 345 ntBASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nkx6-1Q99MA9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-1Q99MA9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Nkx6-1Q99MA9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx6-1Q99MA9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.46□□□□□ -0.1
Nkx6-1Q99MA9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx6-1Q99MA9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms