Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Gm4899-201ENSMUST00000178708 719 ntBASIC13.56□□□□□ -0.24
Scrt1Q99M85 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.56□□□□□ -0.24
Scrt1Q99M85 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scrt1Q99M85 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Gm13616-201ENSMUST00000120600 222 ntBASIC13.55□□□□□ -0.24
Scrt1Q99M85 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 AA543401-201ENSMUST00000164248 1269 ntBASIC13.55□□□□□ -0.24
Scrt1Q99M85 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Gm44492-201ENSMUST00000197012 141 ntBASIC13.55□□□□□ -0.24
Scrt1Q99M85 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scrt1Q99M85 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.54□□□□□ -0.24
Scrt1Q99M85 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Gm17968-201ENSMUST00000194902 784 ntBASIC13.54□□□□□ -0.24
Scrt1Q99M85 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.54□□□□□ -0.24
Scrt1Q99M85 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms