Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cttnbp2nlQ99LJ0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Mir5130-201ENSMUST00000175160 84 ntBASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cttnbp2nlQ99LJ0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cttnbp2nlQ99LJ0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cttnbp2nlQ99LJ0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cttnbp2nlQ99LJ0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cttnbp2nlQ99LJ0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cttnbp2nlQ99LJ0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Gm37055-201ENSMUST00000191866 133 ntBASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cttnbp2nlQ99LJ0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cttnbp2nlQ99LJ0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cttnbp2nlQ99LJ0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cttnbp2nlQ99LJ0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cttnbp2nlQ99LJ0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms