Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.13■□□□□ 0.49
Hps4Q99KG7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Gm20553-201ENSMUST00000204205 844 ntBASIC18.13■□□□□ 0.49
Hps4Q99KG7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Hps4Q99KG7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.13■□□□□ 0.49
Hps4Q99KG7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hps4Q99KG7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.12■□□□□ 0.49
Hps4Q99KG7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Gm9385-201ENSMUST00000117563 472 ntBASIC18.12■□□□□ 0.49
Hps4Q99KG7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.12■□□□□ 0.49
Hps4Q99KG7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.12■□□□□ 0.49
Hps4Q99KG7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.12■□□□□ 0.49
Hps4Q99KG7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Gm16198-201ENSMUST00000118766 670 ntBASIC18.11■□□□□ 0.49
Hps4Q99KG7 Gm15920-201ENSMUST00000118998 402 ntBASIC18.11■□□□□ 0.49
Hps4Q99KG7 Gm11745-201ENSMUST00000121669 448 ntBASIC18.11■□□□□ 0.49
Hps4Q99KG7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hps4Q99KG7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.1■□□□□ 0.49
Hps4Q99KG7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Gm10576-201ENSMUST00000191927 825 ntBASIC18.1■□□□□ 0.49
Hps4Q99KG7 Gm44335-201ENSMUST00000196879 141 ntBASIC18.1■□□□□ 0.49
Hps4Q99KG7 Gm44297-201ENSMUST00000198304 141 ntBASIC18.1■□□□□ 0.49
Hps4Q99KG7 Gm44346-201ENSMUST00000198851 141 ntBASIC18.1■□□□□ 0.49
Hps4Q99KG7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hps4Q99KG7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hps4Q99KG7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Hps4Q99KG7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hps4Q99KG7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps4Q99KG7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps4Q99KG7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps4Q99KG7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hps4Q99KG7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms