Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.8■□□□□ 0.44
Rfc4Q99J62 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Rpph1-201ENSMUST00000175096 319 ntBASIC17.8■□□□□ 0.44
Rfc4Q99J62 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.8■□□□□ 0.44
Rfc4Q99J62 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.79■□□□□ 0.44
Rfc4Q99J62 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.79■□□□□ 0.44
Rfc4Q99J62 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Mir449b-201ENSMUST00000104833 80 ntBASIC17.79■□□□□ 0.44
Rfc4Q99J62 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc4Q99J62 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.78■□□□□ 0.44
Rfc4Q99J62 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Gm22175-201ENSMUST00000175007 78 ntBASIC17.78■□□□□ 0.44
Rfc4Q99J62 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rfc4Q99J62 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc4Q99J62 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Gm9385-201ENSMUST00000117563 472 ntBASIC17.77■□□□□ 0.44
Rfc4Q99J62 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.77■□□□□ 0.44
Rfc4Q99J62 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc4Q99J62 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rfc4Q99J62 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms