Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.3■□□□□ 0.04
Slc44a3Q921V7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc44a3Q921V7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Sybu-209ENSMUST00000228639 4113 ntBASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a3Q921V7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.28■□□□□ 0.04
Slc44a3Q921V7 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc44a3Q921V7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc44a3Q921V7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms