Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Gm18622-201ENSMUST00000219361 595 ntBASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 BC037039-201ENSMUST00000192003 2205 ntBASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha3Q91Y16 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Gm25990-201ENSMUST00000102440 86 ntBASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Gm8344-201ENSMUST00000119813 856 ntBASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha3Q91Y16 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Gm13418-201ENSMUST00000119097 944 ntBASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha3Q91Y16 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms