Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb4Q91XZ6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Gm27742-201ENSMUST00000184667 60 ntBASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb4Q91XZ6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.39■□□□□ 0.05
Pcdhb4Q91XZ6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms