Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.68■□□□□ 0.42
Trex1Q91XB0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Gm2272-201ENSMUST00000194903 582 ntBASIC17.68■□□□□ 0.42
Trex1Q91XB0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Trex1Q91XB0 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.68■□□□□ 0.42
Trex1Q91XB0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Trex1Q91XB0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trex1Q91XB0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.67■□□□□ 0.42
Trex1Q91XB0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.67■□□□□ 0.42
Trex1Q91XB0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.67■□□□□ 0.42
Trex1Q91XB0 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.67■□□□□ 0.42
Trex1Q91XB0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.67■□□□□ 0.42
Trex1Q91XB0 Gm10154-201ENSMUST00000084445 354 ntBASIC17.67■□□□□ 0.42
Trex1Q91XB0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trex1Q91XB0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Trex1Q91XB0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.66■□□□□ 0.42
Trex1Q91XB0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trex1Q91XB0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.66■□□□□ 0.42
Trex1Q91XB0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trex1Q91XB0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms