Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Gm15565-201ENSMUST00000118890 427 ntBASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Gm27389-201ENSMUST00000183622 195 ntBASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh18Q8VHR0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh18Q8VHR0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh18Q8VHR0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh18Q8VHR0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh18Q8VHR0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Pcdh18Q8VHR0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh18Q8VHR0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh18Q8VHR0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh18Q8VHR0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms