Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rab40cQ8VHQ4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab40cQ8VHQ4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Gm2274-201ENSMUST00000184539 609 ntBASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.66□□□□□ -0.38
Rab40cQ8VHQ4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms