Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ndc1Q8VCB1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ndc1Q8VCB1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ndc1Q8VCB1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ndc1Q8VCB1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Ndc1Q8VCB1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Gm15467-201ENSMUST00000120582 445 ntBASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ndc1Q8VCB1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Gm8344-201ENSMUST00000119813 856 ntBASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Gm6257-201ENSMUST00000163864 910 ntBASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ndc1Q8VCB1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Gm5682-201ENSMUST00000173402 505 ntBASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms