Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Lsm1Q8VC85 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm1Q8VC85 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm1Q8VC85 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Gm14722-201ENSMUST00000118943 689 ntBASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms