Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp33Q8R5K2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp33Q8R5K2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
Usp33Q8R5K2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp33Q8R5K2 Mir7023-201ENSMUST00000185093 64 ntBASIC17.79■□□□□ 0.44
Usp33Q8R5K2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp33Q8R5K2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp33Q8R5K2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Usp33Q8R5K2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Usp33Q8R5K2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Usp33Q8R5K2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Gm22175-201ENSMUST00000175007 78 ntBASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp33Q8R5K2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Usp33Q8R5K2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp33Q8R5K2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Gm9385-201ENSMUST00000117563 472 ntBASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.76■□□□□ 0.43
Usp33Q8R5K2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp33Q8R5K2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp33Q8R5K2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms