Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Gm15358-201ENSMUST00000119249 520 ntBASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Gm27459-201ENSMUST00000184860 107 ntBASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.54■□□□□ 0.56
Top1mtQ8R4U6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Gm11780-201ENSMUST00000136880 516 ntBASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 BC037039-201ENSMUST00000192003 2205 ntBASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Top1mtQ8R4U6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Gm24589-201ENSMUST00000116692 94 ntBASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Gm4535-201ENSMUST00000182274 558 ntBASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Gm10355-201ENSMUST00000097146 517 ntBASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Top1mtQ8R4U6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Top1mtQ8R4U6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Gm27646-201ENSMUST00000183989 110 ntBASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.51■□□□□ 0.55
Top1mtQ8R4U6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Gm17971-201ENSMUST00000190239 806 ntBASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Gm6296-201ENSMUST00000222599 943 ntBASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Top1mtQ8R4U6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms