Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Gm37722-201ENSMUST00000193757 208 ntBASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup35Q8R4R6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nup35Q8R4R6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.39
Nup35Q8R4R6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Gm13436-201ENSMUST00000120418 567 ntBASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.64□□□□□ -0.39
Nup35Q8R4R6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms