Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim31Q8R0K2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Gm25745-201ENSMUST00000174945 133 ntBASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim31Q8R0K2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Mir6404-201ENSMUST00000183699 94 ntBASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim31Q8R0K2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim31Q8R0K2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms