Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm5566-201ENSMUST00000116118 459 ntBASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col23a1Q8K4G2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Gm4875-201ENSMUST00000118257 786 ntBASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Gm9719-201ENSMUST00000162765 543 ntBASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col23a1Q8K4G2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Col23a1Q8K4G2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Gm20445-201ENSMUST00000061905 565 ntBASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col23a1Q8K4G2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col23a1Q8K4G2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Gm15824-201ENSMUST00000119516 955 ntBASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Gm43703-201ENSMUST00000200523 763 ntBASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Gm15823-201ENSMUST00000064305 670 ntBASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms