Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cchcr1Q8K2I2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cchcr1Q8K2I2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cchcr1Q8K2I2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cchcr1Q8K2I2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cchcr1Q8K2I2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Cchcr1Q8K2I2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cchcr1Q8K2I2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cchcr1Q8K2I2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Gm15372-201ENSMUST00000120729 834 ntBASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Gm12497-201ENSMUST00000138778 237 ntBASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Gm25745-201ENSMUST00000174945 133 ntBASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cchcr1Q8K2I2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cchcr1Q8K2I2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cchcr1Q8K2I2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Gm8344-201ENSMUST00000119813 856 ntBASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Gm27357-201ENSMUST00000183754 135 ntBASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 Gm33142-201ENSMUST00000193913 867 ntBASIC18.3■□□□□ 0.52
Cchcr1Q8K2I2 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms